Skip to main content
  1. Categories/

Publication

2024


Explicit description of viral capsid subunit shapes by unfolding dihedrons

Our collaborative paper with Dr. Tachi (University of Tokyo), Toyooka-san, Nishimoto-san, Tendo-san, and Dr. Horiyama (Hokkaido University) on viral capsid structure tiling has been published in Communications Biology.

Virus capsid structures are formed by proteins of the same shape assembling into icosahedra, but the possible tile shapes were not well understood. Through this collaboration with the Tachi group and Dr. Horiyama, who are experts in tiling, we developed a framework to explicitly describe capsid tile shapes and applied it to classify actual viral capsid structures.

2020


Publications

Papers #

  • T. Kawai, and Y. Matsunaga* “AFM-Fold: Rapid reconstruction of protein conformations from AFM images” Biophysical Journal 125, 3845-3861 (2026) DOI:10.1016/j.bpj.2026.06.022

  • 松永康佑*、大金智則、渕上壮太郎、高田彰二 “エンドツーエンド微分可能探針形状推定法によるAFM画像の鮮明化” 生物物理 65巻6号, 328-332 (2025) DOI:10.2142/biophys.65.328